Skip Navigation


Briefings in Bioinformatics Advance Access originally published online on September 2, 2006
Briefings in Bioinformatics 2007 8(1):2-5; doi:10.1093/bib/bbl030
This Article
Right arrow Full Text Freely available
Right arrow FREE Full Text (PDF) Freely available
Right arrow All Versions of this Article:
8/1/2    most recent
bbl030v1
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Services
Right arrow Email this article to a friend
Right arrow Similar articles in this journal
Right arrow Similar articles in ISI Web of Science
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Add to My Personal Archive
Right arrow Download to citation manager
Right arrow Search for citing articles in:
ISI Web of Science (8)
Right arrowRequest Permissions
Google Scholar
Right arrow Articles by Eyre, T. A.
Right arrow Articles by Bruford, E. A.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Eyre, T. A.
Right arrow Articles by Bruford, E. A.
Social Bookmarking
Add to CiteULike   Add to Connotea   Add to Del.icio.us  
What's this?

© The Author 2006. Published by Oxford University Press. For Permissions, please email: journals.permissions@oxfordjournals.org

HCOP: a searchable database of human orthology predictions

Tina A. Eyre, Mathew W. Wright, Michael J. Lush and Elspeth A. Bruford

Corresponding author. Elspeth A. Bruford, HUGO Gene Nomenclature Committee (HGNC), Department of Biology, University College London, Wolfson House, 4 Stephenson Way, London, NW1 2HE. Tel: 0207 679 7410; Fax: +44 20 7387 3496; E-mail: nome{at}galton.ucl.ac.uk.

The HUGO Gene Nomenclature Committee (HGNC) Comparison of Orthology Predictions (HCOP) search tool combines the human, mouse, rat and chicken orthology assertions made by PhIGs, HomoloGene, Ensembl, Inparanoid, Mouse Genome Informatics (MGI) and HGNC, enabling users to identify predicted ortholog pairs for a specified gene or genes. The HCOP resource provides a useful method to integrate, compare and access a variety of disparate sources of human orthology data.

The HCOP search tool, data and documentation are available at http://www.gene.ucl.ac.uk/hcop.

Keywords: orthology, nomenclature, database, comparative, genes


Add to CiteULike CiteULike   Add to Connotea Connotea   Add to Del.icio.us Del.icio.us    What's this?


This article has been cited by other articles:


Home page
 Nucleic Acids ResHome page
J. Muller, D. Szklarczyk, P. Julien, I. Letunic, A. Roth, M. Kuhn, S. Powell, C. von Mering, T. Doerks, L. J. Jensen, et al.
eggNOG v2.0: extending the evolutionary genealogy of genes with enhanced non-supervised orthologous groups, species and functional annotations
Nucleic Acids Res., November 9, 2009; (2009) gkp951v1.
[Abstract] [Full Text] [PDF]

Home page
 Nucleic Acids ResHome page
A. Kuzniar, K. Lin, Y. He, H. Nijveen, S. Pongor, and J. A. M. Leunissen
ProGMap: an integrated annotation resource for protein orthology
Nucleic Acids Res., July 1, 2009; 37(suppl_2): W428 - W434.
[Abstract] [Full Text] [PDF]

Home page
 Nucleic Acids ResHome page
G. Pavesi, F. Zambelli, C. Caggese, and G. Pesole
Exalign: a new method for comparative analysis of exon-intron gene structures
Nucleic Acids Res., May 1, 2008; 36(8): e47 - e47.
[Abstract] [Full Text] [PDF]

Home page
 Nucleic Acids ResHome page
E. A. Bruford, M. J. Lush, M. W. Wright, T. P. Sneddon, S. Povey, and E. Birney
The HGNC Database in 2008: a resource for the human genome
Nucleic Acids Res., January 11, 2008; 36(suppl_1): D445 - D448.
[Abstract] [Full Text] [PDF]


Disclaimer: Please note that abstracts for content published before 1996 were created through digital scanning and may therefore not exactly replicate the text of the original print issues. All efforts have been made to ensure accuracy, but the Publisher will not be held responsible for any remaining inaccuracies. If you require any further clarification, please contact our Customer Services Department.