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Contents: Volume 10, Number 3, May 2009   [Index by Author] 

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To see an article, click its [Full Text] or [PDF] link. To review many abstracts, check the boxes to the left of the titles you want, and click the 'Get All Checked Abstract(s)' button. To see one abstract at a time, click its [Abstract] link.

Papers Back

Malay Kumar Basu, Eugenia Poliakov, and Igor B. Rogozin
Domain mobility in proteins: functional and evolutionary implications
Briefings in Bioinformatics Advance Access published on January 16, 2009
Brief Bioinform 2009 10: 205-216; doi:10.1093/bib/bbn057 [Abstract] [Full Text] [PDF] [Request Permissions]  

Nurcan Tuncbag, Gozde Kar, Ozlem Keskin, Attila Gursoy, and Ruth Nussinov
A survey of available tools and web servers for analysis of protein–protein interactions and interfaces
Briefings in Bioinformatics Advance Access published on February 24, 2009
Brief Bioinform 2009 10: 217-232; doi:10.1093/bib/bbp001 [Abstract] [Full Text] [PDF] [Request Permissions]  

Iakes Ezkurdia, Lisa Bartoli, Piero Fariselli, Rita Casadio, Alfonso Valencia, and Michael L. Tress
Progress and challenges in predicting protein–protein interaction sites
Briefings in Bioinformatics Advance Access published on April 3, 2009
Brief Bioinform 2009 10: 233-246; doi:10.1093/bib/bbp021 [Abstract] [Full Text] [PDF] [Request Permissions]  

Peng Zhou and Zhicai Shang
2D molecular graphics: a flattened world of chemistry and biology
Briefings in Bioinformatics Advance Access published on March 30, 2009
Brief Bioinform 2009 10: 247-258; doi:10.1093/bib/bbp013 [Abstract] [Full Text] [PDF] [Supplementary Data] [Request Permissions]  

William B. Langdon, Graham J. G. Upton, and Andrew P. Harrison
Probes containing runs of guanines provide insights into the biophysics and bioinformatics of Affymetrix GeneChips
Briefings in Bioinformatics Advance Access published on April 8, 2009
Brief Bioinform 2009 10: 259-277; doi:10.1093/bib/bbp018 [Abstract] [Full Text] [PDF] [Request Permissions]  

Paolo Ballarini, Rosita Guido, Tommaso Mazza, and Davide Prandi
Taming the complexity of biological pathways through parallel computing
Briefings in Bioinformatics Advance Access published on April 1, 2009
Brief Bioinform 2009 10: 278-288; doi:10.1093/bib/bbp020 [Abstract] [Full Text] [PDF] [Request Permissions]  

Robert M. Flight and Peter D. Wentzell
Potential Bias in GO::TermFinder
Briefings in Bioinformatics Advance Access published on March 11, 2009
Brief Bioinform 2009 10: 289-294; doi:10.1093/bib/bbn054 [Abstract] [Full Text] [PDF] [Request Permissions]  

Masanori Arita
A pitfall of wiki solution for biological databases
Briefings in Bioinformatics Advance Access published on December 6, 2008
Brief Bioinform 2009 10: 295-296; doi:10.1093/bib/bbn053 [Abstract] [Full Text] [PDF] [Request Permissions]  

Bill Andreopoulos, Aijun An, Xiaogang Wang, and Michael Schroeder
A roadmap of clustering algorithms: finding a match for a biomedical application
Briefings in Bioinformatics Advance Access published on February 24, 2009
Brief Bioinform 2009 10: 297-314; doi:10.1093/bib/bbn058 [Abstract] [Full Text] [PDF] [Request Permissions]  

Lee J. Lancashire, Christophe Lemetre, and Graham R. Ball
An introduction to artificial neural networks in bioinformatics—application to complex microarray and mass spectrometry datasets in cancer studies
Briefings in Bioinformatics Advance Access published on March 23, 2009
Brief Bioinform 2009 10: 315-329; doi:10.1093/bib/bbp012 [Abstract] [Full Text] [PDF] [Request Permissions]  

Francesco Pappalardo, Mark D. Halling-Brown, Nicolas Rapin, Ping Zhang, Davide Alemani, Andrew Emerson, Paola Paci, Patrice Duroux, Marzio Pennisi, Arianna Palladini, Olivo Miotto, Daniel Churchill, Elda Rossi, Adrian J. Shepherd, David S. Moss, Filippo Castiglione, Massimo Bernaschi, Marie-Paule Lefranc, Søren Brunak, Santo Motta, Pier-Luigi Lollini, Kaye E. Basford, and Vladimir Brusic
ImmunoGrid, an integrative environment for large-scale simulation of the immune system for vaccine discovery, design and optimization
Brief Bioinform 2009 10: 330-340; doi:10.1093/bib/bbp014 [Abstract] [Full Text] [PDF] [Request Permissions]  

Book Review Back

Nadav Ahituv
Introduction to Computational Genomics: A Case Studies Approach Nello Cristianini and Matthew W. Hahn.
Briefings in Bioinformatics Advance Access published on March 9, 2009
Brief Bioinform 2009 10: 341; doi:10.1093/bib/bbp009 [Extract] [Full Text] [PDF] [Request Permissions]  

To see an article, click its [Full Text] or [PDF] link. To review many abstracts, check the boxes to the left of the titles you want, and click the 'Get All Checked Abstract(s)' button. To see one abstract at a time, click its [Abstract] link.