Briefings in Bioinformatics

Editorial

Russ B. Altman

Editorial: Building successful biological databases
Brief Bioinform 2004 5: 4-5; doi:10.1093/bib/5.1.4 [PDF] [Request Permissions]  

Special Issue papers

Selina S. Dwight, Rama Balakrishnan, Karen R. Christie, Maria C. Costanzo, Kara Dolinski, Stacia R. Engel, Becket Feierbach, Dianna G. Fisk, Jodi Hirschman, Eurie L. Hong, Laurie Issel-Tarver, Robert S. Nash, Anand Sethuraman, Barry Starr, Chandra L. Theesfeld, Rey Andrada, Gail Binkley, Qing Dong, Christopher Lane, Mark Schroeder, Shuai Weng, David Botstein, and J. Michael Cherry

Saccharomyces genome database: Underlying principles and organisation
Brief Bioinform 2004 5: 9-22; doi:10.1093/bib/5.1.9 [Abstract] [PDF] [Request Permissions]  

Philip E. Bourne, John Westbrook, and Helen M. Berman

The Protein Data Bank and lessons in data management
Brief Bioinform 2004 5: 23-30; doi:10.1093/bib/5.1.23 [Abstract] [PDF] [Request Permissions]  

Ewan Birney and Michele Clamp

Biological database design and implementation
Brief Bioinform 2004 5: 31-38; doi:10.1093/bib/5.1.31 [Abstract] [PDF] [Request Permissions]  

Amos Bairoch, Brigitte Boeckmann, Serenella Ferro, and Elisabeth Gasteiger

Swiss-Prot: Juggling between evolution and stability
Brief Bioinform 2004 5: 39-55; doi:10.1093/bib/5.1.39 [Abstract] [PDF] [Request Permissions]  

Regular paper

Tim Clark, Sean Martin, and Ted Liefeld

Globally distributed object identification for biological knowledgebases
Brief Bioinform 2004 5: 59-70; doi:10.1093/bib/5.1.59 [Abstract] [PDF] [Request Permissions]  

Tutorial section

Lisa Mullan

Domains and motifs—proteins in bite-sized chunks
Brief Bioinform 2004 5: 71-74; doi:10.1093/bib/5.1.71 [PDF] [Request Permissions]  

Abstracts

I. King Jordan

Abstracts
Brief Bioinform 2004 5: 75-81; doi:10.1093/bib/5.1.75 [PDF] [Request Permissions]  

Software review

Helge-Friedrich Tippmann

Analysis for free: Comparing programs for sequence analysis
Brief Bioinform 2004 5: 82-87; doi:10.1093/bib/5.1.82 [Abstract] [PDF] [Request Permissions]  

News section

Paul Grosu and Eitan Rubin

News section
Brief Bioinform 2004 5: 88-89; doi:10.1093/bib/5.1.88 [PDF] [Request Permissions]  

Jaime Prilusky

News section
Brief Bioinform 2004 5: 89-90; doi:10.1093/bib/5.1.89 [PDF] [Request Permissions]  

Lakshmanan Iyer

News section
Brief Bioinform 2004 5: 90-92; doi:10.1093/bib/5.1.90 [PDF] [Request Permissions]  

Book reviews

David Konerding

An Essential Guide to the Basic Local Alignment Search Tool: BLAST
Brief Bioinform 2004 5: 93-94; doi:10.1093/bib/5.1.93 [PDF] [Request Permissions]  

Alain Laederach

Perl Programming for Biologists
Brief Bioinform 2004 5: 95-96; doi:10.1093/bib/5.1.95 [PDF] [Request Permissions]  

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