Briefings in Bioinformatics

Editorial

Charlie Hodgman

The informatics of post-translational modification and its implications for systems biology
Brief Bioinform 2004 5: 104-105; doi:10.1093/bib/5.2.104 [PDF] [Request Permissions]  

Papers

Christian Schönbach

From masking repeats to identifying functional repeats in the mouse transcriptome
Brief Bioinform 2004 5: 107-117; doi:10.1093/bib/5.2.107 [Abstract] [PDF] [Request Permissions]  

Rajeev K. Azad and Mark Borodovsky

Probabilistic methods of identifying genes in prokaryotic genomes: Connections to the HMM theory
Brief Bioinform 2004 5: 118-130; doi:10.1093/bib/5.2.118 [Abstract] [PDF] [Request Permissions]  

Igor B. Rogozin, Kira S. Makarova, Yuri I. Wolf, and Eugene V. Koonin

Computational approaches for the analysis of gene neighbourhoods in prokaryotic genomes
Brief Bioinform 2004 5: 131-149; doi:10.1093/bib/5.2.131 [Abstract] [PDF] [Request Permissions]  

Sudhir Kumar, Koichiro Tamura, and Masatoshi Nei

MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment
Brief Bioinform 2004 5: 150-163; doi:10.1093/bib/5.2.150 [Abstract] [PDF] [Request Permissions]  

Claus-Wilhelm von der Lieth, Andreas Bohne-Lang, Klaus Karl Lohmann, and Martin Frank

Bioinformatics for glycomics: Status, methods, requirements and perspectives
Brief Bioinform 2004 5: 164-178; doi:10.1093/bib/5.2.164 [Abstract] [PDF] [Request Permissions]  

Lesheng Kong and Shoba Ranganathan

Delineation of modular proteins: Domain boundary prediction from sequence information
Brief Bioinform 2004 5: 179-192; doi:10.1093/bib/5.2.179 [Abstract] [PDF] [Request Permissions]  

Tutorial section

Lisa Mullan

Jemboss reloaded
Brief Bioinform 2004 5: 193-195; doi:10.1093/bib/5.2.193 [PDF] [Request Permissions]  

Abstracts

I. King Jordan

Abstracts
Brief Bioinform 2004 5: 196-203; doi:10.1093/bib/5.2.196 [PDF] [Request Permissions]  

News section

Josiah Altschuler

News section
Brief Bioinform 2004 5: 204; doi:10.1093/bib/5.2.204 [PDF] [Request Permissions]  

Marilyn Safran and Doron Lancet

News section
Brief Bioinform 2004 5: 204-205; doi:10.1093/bib/5.2.204-a [PDF] [Request Permissions]  

Lakshmanan Iyer

News section
Brief Bioinform 2004 5: 205-206; doi:10.1093/bib/5.2.205 [PDF] [Request Permissions]  

Book reviews

Predrag Radivojac

Protein Structure Prediction: Bioinformatics Approach
Brief Bioinform 2004 5: 207-209; doi:10.1093/bib/5.2.207 [PDF] [Request Permissions]  

Sean Mooney

Bioinformatics for Geneticists
Brief Bioinform 2004 5: 209-210; doi:10.1093/bib/5.2.209 [PDF] [Request Permissions]  

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