Briefings in Bioinformatics

Editorial

Martin Bishop

Editorial
Brief Bioinform 2004 5: 216; doi:10.1093/bib/5.3.216 [PDF] [Request Permissions]  

Papers

Giulio Pavesi, Giancarlo Mauri, and Graziano Pesole

In silico representation and discovery of transcription factor binding sites
Brief Bioinform 2004 5: 217-236; doi:10.1093/bib/5.3.217 [Abstract] [PDF] [Request Permissions]  

Mihai Pop, Adam Phillippy, Arthur L. Delcher, and Steven L. Salzberg

Comparative genome assembly
Brief Bioinform 2004 5: 237-248; doi:10.1093/bib/5.3.237 [Abstract] [PDF] [Request Permissions]  

Shintaro Katayama, Mutsumi Kanamori, and Yoshihide Hayashizaki

Integrated analysis of the genome and the transcriptome by FANTOM
Brief Bioinform 2004 5: 249-258; doi:10.1093/bib/5.3.249 [Abstract] [PDF] [Request Permissions]  

Corrado Priami and Paola Quaglia

Modelling the dynamics of biosystems
Brief Bioinform 2004 5: 259-269; doi:10.1093/bib/5.3.259 [Abstract] [PDF] [Request Permissions]  

Johannes Mandel, Niall M. Palfreyman, Jesus A. Lopez, and Werner Dubitzky

Representing bioinformatics causality
Brief Bioinform 2004 5: 270-283; doi:10.1093/bib/5.3.270 [Abstract] [PDF] [Request Permissions]  

Tutorial section

Lisa Mullan

‘We are gathered here today’ — EST cluster databases
Brief Bioinform 2004 5: 284-286; doi:10.1093/bib/5.3.284 [PDF] [Request Permissions]  

Abstracts

I. King Jordan

Abstracts
Brief Bioinform 2004 5: 287-293; doi:10.1093/bib/5.3.287 [PDF] [Request Permissions]  

News section

W. James Kent and Donna Karolchik

News section
Brief Bioinform 2004 5: 294-295; doi:10.1093/bib/5.3.294 [PDF] [Request Permissions]  

Reddy Gali

News section
Brief Bioinform 2004 5: 295-297; doi:10.1093/bib/5.3.295 [PDF] [Request Permissions]  

Ron Ophir

News section
Brief Bioinform 2004 5: 297-299; doi:10.1093/bib/5.3.297 [PDF] [Request Permissions]  

Software review

Don Gilbert

Bioinformatics software resources
Brief Bioinform 2004 5: 300-304; doi:10.1093/bib/5.3.300 [Abstract] [PDF] [Request Permissions]  

Book reviews

Jake Chen

Digital Code of Life: How Bioinformatics is Revolutionizing Science, Medicine, and Business
Brief Bioinform 2004 5: 305-307; doi:10.1093/bib/5.3.305 [PDF] [Request Permissions]  

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